Test Report

Summary

Started 2024-04-05 15:40:32
Ended 2024-04-05 15:44:02
Duration 0:03:29.371137
Total run time 0:03:14.928200
2
2 passed

Warnings

WARNING
/opt/conda/envs/ci_env/lib/python3.10/site-packages/h5py/__init__.py:36
h5py is running against HDF5 1.14.3 when it was built against 1.14.2, this may cause problems

Tests

tests/test_sicor_enmap.py 2 0:03:14.928200

PASSED TestSicor_EnMAP_AC_DLR::test_ac_enmap_land_only 0:01:36.692830

Started 2024-04-05 15:40:39
Ended 2024-04-05 15:42:15
Duration 0:01:36.692830
Markers
Fixtures request

Setup

Call

Captured stdout call

################################################
#                                              #
# Test reading EnMAP Level-1B product          #
#                                              #
################################################


/root/EnPT/tests/data/EnMAP_Level_1B/ENMAP01-____L1B-DT000400126_20170218T110115Z_002_V000204_20200206T182719Z__rows700-799.zip
2024/04/05 15:40:39:   Reading metadata for VNIR detector...
2024/04/05 15:40:39:   Calculating solar irradiance...
2024/04/05 15:40:39:   Reading metadata for SWIR detector...
2024/04/05 15:40:40:   Calculating solar irradiance...
2024/04/05 15:40:40:   Reading image masks in VNIR sensor geometry.
2024/04/05 15:40:40:   Converting DN values to radiance [mW/m^2/sr/nm] for VNIR detector...
2024/04/05 15:40:40:   Converting DN values to radiance [mW/m^2/sr/nm] for SWIR detector...
2024/04/05 15:40:40:   Computing VNIR geolayer...
2024/04/05 15:40:41:   Computing SWIR geolayer...
2024/04/05 15:40:41:   Pre-processing DEM for VNIR...
2024/04/05 15:40:41:   Transforming DEM to VNIR sensor geometry (using first band of VNIR geolayer)...
2024/04/05 15:40:42:   Pre-processing DEM for SWIR...
2024/04/05 15:40:42:   Transforming DEM to SWIR sensor geometry (using first band of SWIR geolayer)...
Done!



################################################
#                                              #
# Test EnMAP atmospheric correction            #
#                                              #
################################################



########################
# Processing Land only #
########################
2024/04/05 15:40:44:   Setting up forward operator...
2024/04/05 15:40:44:   SICOR is applied to land pixels only. This may result in edge effects, e.g., at coastlines...
2024/04/05 15:40:45:   Transforming VNIR data to SWIR sensor geometry to enable first guess retrievals for liquid water and ice...
2024/04/05 15:40:46:   Getting observation metadata...
2024/04/05 15:40:46:   Checking if observation metadata values are within LUT value ranges...
2024/04/05 15:40:46:   Loading solar irradiance model...
2024/04/05 15:40:46:   Loading RT LUT...
2024/04/05 15:40:46:   LUT file was properly downloaded and is available for AC!
2024/04/05 15:40:46:   Converting LUT to Fontenla solar model...
2024/04/05 15:40:46:   Resampling LUT to EnMAP wavelengths...
2024/04/05 15:41:08:   Reducing grid dimensionality of LUT to increase interpolation speed...
2024/04/05 15:41:08:   Calculating absorption coefficients of liquid water and ice...
2024/04/05 15:41:09:   Performing first guess water vapor retrieval based on a common band ratio using VNIR data...
2024/04/05 15:41:17:   Transforming CWV first guess map to SWIR sensor geometry to enable segmentation and 3 phases of water retrieval...
2024/04/05 15:41:18:   Performing first guess liquid water retrieval based on the NDWI...
2024/04/05 15:41:19:   Performing first guess ice retrieval based on the NDSI...
2024/04/05 15:41:19:   Calculating first guess for intercept and slope of absorption feature continuum...
2024/04/05 15:41:19:   Segmenting SWIR L1B spectra to enhance processing speed...
2024/04/05 15:41:20:   Preparing segmented SWIR L1B data cube...
2024/04/05 15:41:20:   Performing 3 phases of water retrieval...
2024/04/05 15:41:20:   Setting up multiprocessing...
2024/04/05 15:41:20:   Multiprocessing on 32 cpu's
2024/04/05 15:41:20:   Preparing optimal estimation input...
2024/04/05 15:41:20:   Optimization...
2024/04/05 15:41:25:   Done!
2024/04/05 15:41:25:   Runtime: 4.94 s
2024/04/05 15:41:25:   Smoothing segmented CWV retrieval map...
2024/04/05 15:41:25:   Transforming smoothed CWV retrieval map to VNIR sensor geometry to enable AC of VNIR data...
2024/04/05 15:41:26:   Starting surface reflectance retrieval...
2024/04/05 15:41:26:   Calculating surface reflectance for vnir detector...
2024/04/05 15:41:49:   Calculating surface reflectance for swir detector...
2024/04/05 15:42:15:   Smoothing segmented liquid water and ice maps...
2024/04/05 15:42:15:   SICOR atmospheric correction for EnMAP in combined mode successfully finished!
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2024/04/05 15:42:15:   VNIR L2A data contain negative values indicating an overcorrection. Please check for errors in the input data, the options file, or the processing code.
2024/04/05 15:42:15:   SWIR L2A data contain negative values indicating an overcorrection. Please check for errors in the input data, the options file, or the processing code.

Teardown

PASSED TestSicor_EnMAP_AC_DLR::test_ac_enmap_land_water 0:01:38.235371

Started 2024-04-05 15:42:15
Ended 2024-04-05 15:43:54
Duration 0:01:38.235371
Markers
Fixtures request

Setup

Call

Captured stdout call

################################################
#                                              #
# Test reading EnMAP Level-1B product          #
#                                              #
################################################


/root/EnPT/tests/data/EnMAP_Level_1B/ENMAP01-____L1B-DT000400126_20170218T110115Z_002_V000204_20200206T182719Z__rows700-799.zip
2024/04/05 15:42:16:   Reading metadata for VNIR detector...
2024/04/05 15:42:16:   Calculating solar irradiance...
2024/04/05 15:42:16:   Reading metadata for SWIR detector...
2024/04/05 15:42:16:   Calculating solar irradiance...
2024/04/05 15:42:16:   Reading image masks in VNIR sensor geometry.
2024/04/05 15:42:17:   Converting DN values to radiance [mW/m^2/sr/nm] for VNIR detector...
2024/04/05 15:42:17:   Converting DN values to radiance [mW/m^2/sr/nm] for SWIR detector...
2024/04/05 15:42:17:   Computing VNIR geolayer...
2024/04/05 15:42:17:   Computing SWIR geolayer...
2024/04/05 15:42:17:   Pre-processing DEM for VNIR...
2024/04/05 15:42:17:   Transforming DEM to VNIR sensor geometry (using first band of VNIR geolayer)...
2024/04/05 15:42:19:   Pre-processing DEM for SWIR...
2024/04/05 15:42:19:   Transforming DEM to SWIR sensor geometry (using first band of SWIR geolayer)...
Done!



################################################
#                                              #
# Test EnMAP atmospheric correction            #
#                                              #
################################################



###########################
# Processing Land + Water #
###########################
2024/04/05 15:42:20:   Setting up forward operator...
2024/04/05 15:42:20:   SICOR is applied to land AND water pixels.
2024/04/05 15:42:20:   Transforming VNIR data to SWIR sensor geometry to enable first guess retrievals for liquid water and ice...
2024/04/05 15:42:21:   Getting observation metadata...
2024/04/05 15:42:21:   Checking if observation metadata values are within LUT value ranges...
2024/04/05 15:42:21:   Loading solar irradiance model...
2024/04/05 15:42:21:   Loading RT LUT...
2024/04/05 15:42:21:   LUT file was properly downloaded and is available for AC!
2024/04/05 15:42:21:   Converting LUT to Fontenla solar model...
2024/04/05 15:42:22:   Resampling LUT to EnMAP wavelengths...
2024/04/05 15:42:43:   Reducing grid dimensionality of LUT to increase interpolation speed...
2024/04/05 15:42:43:   Calculating absorption coefficients of liquid water and ice...
2024/04/05 15:42:43:   Performing first guess water vapor retrieval based on a common band ratio using VNIR data...
2024/04/05 15:42:51:   Transforming CWV first guess map to SWIR sensor geometry to enable segmentation and 3 phases of water retrieval...
2024/04/05 15:42:52:   Performing first guess liquid water retrieval based on the NDWI...
2024/04/05 15:42:53:   Performing first guess ice retrieval based on the NDSI...
2024/04/05 15:42:53:   Calculating first guess for intercept and slope of absorption feature continuum...
2024/04/05 15:42:53:   Segmenting SWIR L1B spectra to enhance processing speed...
2024/04/05 15:42:53:   Preparing segmented SWIR L1B data cube...
2024/04/05 15:42:54:   Performing 3 phases of water retrieval...
2024/04/05 15:42:54:   Setting up multiprocessing...
2024/04/05 15:42:54:   Multiprocessing on 32 cpu's
2024/04/05 15:42:54:   Preparing optimal estimation input...
2024/04/05 15:42:54:   Optimization...
2024/04/05 15:43:03:   Done!
2024/04/05 15:43:03:   Runtime: 8.65 s
2024/04/05 15:43:03:   Smoothing segmented CWV retrieval map...
2024/04/05 15:43:03:   Transforming smoothed CWV retrieval map to VNIR sensor geometry to enable AC of VNIR data...
2024/04/05 15:43:03:   Starting surface reflectance retrieval...
2024/04/05 15:43:03:   Calculating surface reflectance for vnir detector...
2024/04/05 15:43:28:   Calculating surface reflectance for swir detector...
2024/04/05 15:43:53:   Smoothing segmented liquid water and ice maps...
2024/04/05 15:43:53:   SICOR atmospheric correction for EnMAP in land mode successfully finished!
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 70%|███████   | 705/1000 [00:17<00:07, 42.09it/s]
 71%|███████   | 710/1000 [00:17<00:06, 42.09it/s]
 72%|███████▏  | 715/1000 [00:17<00:06, 42.13it/s]
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 95%|█████████▍| 948/1000 [00:23<00:01, 42.08it/s]
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 97%|█████████▋| 968/1000 [00:23<00:00, 42.10it/s]
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 98%|█████████▊| 978/1000 [00:24<00:00, 42.13it/s]
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100%|█████████▉| 998/1000 [00:24<00:00, 42.10it/s]
100%|██████████| 1000/1000 [00:24<00:00, 40.59it/s]
2024/04/05 15:43:53:   VNIR L2A data contain negative values indicating an overcorrection. Please check for errors in the input data, the options file, or the processing code.
2024/04/05 15:43:53:   SWIR L2A data contain negative values indicating an overcorrection. Please check for errors in the input data, the options file, or the processing code.

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